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Commit cb06546c authored by Rob Moss's avatar Rob Moss
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Update iRBC removal parameters and plot

The delta_iS parameter is defined in terms of delta_iR and a scaling
parameter, but this was not evident in the model description.
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......@@ -603,11 +603,13 @@ The removal rate \(\delta_i\) of infected RBCs from the circulation into the spl
\Icnet[-1]^{g_d^U} + \left(\delta_{50}^I \cdot \left[
\Icnet[-1] + \Ucnet[-1]
\right]\right)^{g_d^U}
}
} \\
\delta_{iS} &= \delta_{iR} \cdot k_{iS}
\end{align}
| Symbol | Description | Baseline value |
|--------------------|------------------------------|-------------------------|
| \(k_{iS}\) | Schizont scaling parameter | \(`r p$delta_iS_scale`\)|
| \(\delta_{iR}\) | **Pf** ring removal rate | \(`r p$delta_iR`\) |
| \(\delta_{iS}\) | **Pf** schizont removal rate | \(`r p$delta_iS`\) |
| \(\delta_{iR}\) | **Pv** ring removal rate | \(`r pv$delta_iR`\) |
......@@ -637,7 +639,7 @@ ggplot(df_di1, aes(age, value)) +
xlab("iRBC age (hours)") +
scale_y_continuous(
name = "Removal rate (unscaled)",
breaks = c(0.15, 0.30),
breaks = c(p$delta_iR, p$delta_iS),
labels = c(expression(delta[iR]), expression(delta[iS]))
)
```
......
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