Commits · d1ba38f551b602bf08320dab5101bea7923f6c96 · IGR-lab / ChIP-seq

Dec 10, 2021
- annotations updated · d1ba38f5
  lecook authored 3 years ago
  
  d1ba38f5
Dec 07, 2021
- rearranging scripts · c99e9c3b
  lecook authored 3 years ago
  
  c99e9c3b
Sep 14, 2021
- updated · 65bae9dc
  lecook authored 3 years ago
  
  65bae9dc
Sep 11, 2020
- edit input/output folders to run peak calling pipeline on subsampled BAM files · a8013a64
  Laura Cook authored 4 years ago
  
  a8013a64
Aug 27, 2020
- use bedtools merge for pooling peaks instead of just concatenating two files · b3e92f87
  Laura Cook authored 4 years ago
  
  b3e92f87
Aug 07, 2020
- formatting · 2afb49d1
  Laura Cook authored 4 years ago
  
  2afb49d1
- added details in to each step in the snakemake pipeline · 24c71ac3
  Laura Cook authored 4 years ago
  
  24c71ac3
Aug 04, 2020
- updated notes · c5960ccf
  Laura Cook authored 4 years ago
  
  c5960ccf
Jul 24, 2020
- minor formatting changes · e897205f
  Laura Cook authored 4 years ago
  
  e897205f
- added section on phantomPeakquals · 4fec3164
  Laura Cook authored 4 years ago
  
  4fec3164
- add section on library complexity ENCODE guidelines · d023d5d9
  Laura Cook authored 4 years ago
  
  d023d5d9
- compute effective genome size for new assembly · d553fcde
  Laura Cook authored 4 years ago
  
  d553fcde
Jul 09, 2020
- updated · 2e9c096e
  Laura Cook authored 4 years ago
  
  2e9c096e
- updated notes · f56411e7
  Laura Cook authored 4 years ago
  
  f56411e7
- updated conda environment instructions · 3ff3f331
  Laura Cook authored 4 years ago
  
  3ff3f331
Jul 03, 2020
- added consensus peaks rule · 222588f4
  Laura Cook authored 4 years ago
  
  222588f4
- added details to rules · 7696dbff
  Laura Cook authored 4 years ago
  
  7696dbff
- update · d99b314b
  Laura Cook authored 4 years ago
  
  d99b314b
- first committ · 0f5409bf
  Laura Cook authored 4 years ago
  
  0f5409bf
Jul 01, 2020
- updated · ecf5c25b
  Laura Cook authored 4 years ago
  
  ecf5c25b
Jun 23, 2020
- update · 144f827c
  Laura Cook authored 4 years ago
  
  144f827c
- update README · 911c1bbf
  Laura Cook authored 4 years ago
  
  911c1bbf
- Update README.md · 5be06f7f
  Laura Cook authored 4 years ago
  
  5be06f7f
- Update README.md · 2338b484
  Laura Cook authored 4 years ago
  
  2338b484
- Update README.md · 5618d279
  Laura Cook authored 4 years ago
  
  5618d279
- Update README.md · df1d4939
  Laura Cook authored 4 years ago
  
  df1d4939
- Update README.md · 6c35ad55
  Laura Cook authored 4 years ago
  
  6c35ad55
- Add README.md · 4c67a185
  Laura Cook authored 4 years ago
  
  4c67a185