Explore projects

A snakemake pipeline for prediction of genes in eukaryotic genome assemblies.

this is a tech time mlflow example presentation given by Jonathan Garber

Metatranscriptome analysis of pathogens within whole blood of an Indonesian cohort

A suite of Python, R and Bash scripts for simulating RADseq/GBS for pooled GWAS, TWAS and GTWAS

Colorimetric capture of plant health from canopy photographs

R-codes for the publication "Evidence that transcriptional alterations in Sarcoptes scabiei are under tight post-transcriptional (microRNA) control"

ChIP-seq analysis for dunnart (Sminthopsis crassicaudata) craniofacial tissue for H3K4me3 and H3K27ac with cross-species analyses with mouse.

Data and analyses supporting the publication: 'Can dynamic occupancy models improve predictions of species’ range dynamics? A test using Swiss birds.'