|
Welcome to the timtam2 wiki! |
|
#+title: TimTam
|
|
|
|
|
|
|
|
- [[*Installation][Installation]]
|
|
|
|
- [[*Tutorials][Tutorials]]
|
|
|
|
- [[*Glossary][Glossary]]
|
|
|
|
- [[*Citing TimTam][Citing TimTam]]
|
|
|
|
|
|
|
|
* Installation
|
|
|
|
|
|
|
|
There are instructions for the installation of TimTam [[file:./Installation.org][here]].
|
|
|
|
|
|
|
|
* Tutorials
|
|
|
|
|
|
|
|
- [[file:./Tutorial-1.org][Tutorial 1]]
|
|
|
|
|
|
|
|
* Glossary
|
|
|
|
|
|
|
|
Where possible this Wiki should use the terminology outlined in this [[file:./Glossary.org][glossary]].
|
|
|
|
|
|
|
|
* Citing TimTam
|
|
|
|
|
|
|
|
If you use MASTER as part of research that leads to a publication, we ask that
|
|
|
|
you cite the following article:
|
|
|
|
|
|
|
|
Zarebski AE, du Plessis L, Parag KV, Pybus OG (2022) A computationally tractable
|
|
|
|
birth-death model that combines phylogenetic and epidemiological data. PLOS
|
|
|
|
Computational Biology 18(2): e1009805.
|
|
|
|
https://doi.org/10.1371/journal.pcbi.1009805 |